Protein bioinformatics
from protein modifications and networks to proteomics
Protein bioinformatics (Wu)
Wu, Cathy H.
editor.
Arighi, Cecilia N.
editor.
Ross, Karen E.
Ph. D
editor.
text
bibliography
Laboratory manuals.
nyu
washington
springer science
2016c
2017
monographic
eng
xiv, 472 pages : illustrations ; 26 cm.
Protein bioinformatics databases and resources / Chuming Chen, Hongzhan Huang, and Cathy H. Wu -- UniProt protein knowledgebase / Sangya Pundir, Maria J. Martin, and Claire O'Donovan -- Tutorial on protein ontology resources / Cecilia N. Arighi, Harold Drabkin, Karen R. Christie, Karen E. Ross, and Darren A. Natale -- CATH-Gene3D : generation of the resource and its use in obtaining structural and functional annotations for protein sequences / Natalie L. Dawson, Ian Sillitoe, Jonathan G. Lees, Su Datt Lam, and Christine A. Orengo -- Structure-based virtual screening / Qingliang Li and Salim Shah -- Bioinformatics analysis of protein phosphorylation in plant systems biology using P3DB / Qiuming Yao and Dong Xu -- Navigating the glycome space and connecting the glycoproteome / Matthew P. Campbell, Robyn A. Peterson, Elisabeth Gasteiger, Julien Mariethoz, Frederique Lisacek, and Nicolle H. Packer -- Impact of nonsynonymous single-nucleotide variations on post-translational modification sites in human proteins / Naila Gulzar, Hayley Dingerdissen, Cheng Yan, and Raja Mazumder -- Analysis of cysteine redox post-translational modifications in cell biology and drug pharmacology / Revati Wani and Brion W. Murray -- Analysis of protein phosphorylation and its functional impact on protein-protein interactions via text mining of the scientific literature / Qinghua Wang, Karen E. Ross, Hongzhan Huang, Jia Ren, Gang Li, K. Vijay-Shanker, Cathy H. Wu, and Cecilia N. Arighi -- Functional interaction network construction and analysis for disease discovery / Guanming Wu and Robin Haw -- Prediction of protein interactions by structural matching : prediction of PPI networks and the effects of mutations on PPIs that combines sequence and structural information / Nurcan Tuncbag, Ozlem Keskin, Ruth Nussinov, and Attila Gursoy -- NDEx : a community resource for sharing and publishing of biological networks / Rudolf T. Pillich, Jing Chen, Vladimir Rynkov, David Welker, and Dexter Pratt -- Bioinformatics analysis of functional associations of PTMs / Pablo Minguez and Peer Bork -- Bioinformatics analysis of PTM-modified protein interaction networks and complexes / Jonathan Woodsmith, Ulrich Stelzl, and Arunachalam Vinayagam -- iPTMnet : integrative bioinformatics for studying PTM networks / Karen E. Ross, Hongzhan Huang, Jia Ren, Cecilia N. Arighi, Gang Li, Catalina O. Tudor, Mengxi Lv, Jung-Youn Lee, Sheng-Chih Chen, K. Vijay-Shanker, and Cathy H. Wu -- Protein identification from tandem mass spectra by database searching / Nathan J. Edwards -- Bioinformatics analysis of top-down mass spectrometry data with ProSight Lite / Caroline J. DeHart, Ryan T. Fellers, Luca Fornelli, Neil L. Kelleher, and Paul M. Thomas -- Mapping biological networks from quantitative data-independent acquisition mass spectrometry : data to knowledge pipelines / Erin L. Crowgey, Andrea Matlock, Vidya Venkatraman, Justyna Fert-Bober, and Jennifer E. Van Eyk -- Annotation of alternatively spliced proteins and transcripts with protein-folding algorithms and isoform-level functional networks / Hongdong Li, Yang Zhang, Yuanfang Guan, Rajasree Menon, and Gilbert S. Omenn -- Computational and statistical methods for high-throughput mass spectrometry-based PTM analysis / Veit Schwämmle and Marc Vaudel -- Cross-species PTM mapping from phosphoproteomic data / Rima Chaudhuri and Jean Yee Hwa Yang.
edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross.
Includes bibliographical references and index.
Proteomics
Laboratory manuals
Bioinformatics
Laboratory manuals
Proteins
Laboratory manuals
Proteins
Protein Interaction Maps
Protein Folding
Proteomics
Computational Biology
methods
Bioinformatics
Proteins
Proteomics
Analyse de séquence de protéine
méthodes
Biologie informatique
méthodes
Protéines
analyse
Bases de données de protéines
Cartographie d'interactions entre protéines
analyse
Maturation post-traductionnelle des protéines
Protéomique
méthodes
Protéines
Analyse
Protéines
Modifications posttraductionnelles
572/.6
W1 M9616J 2017
QU 55
Protein Bioinformatics : From Protein Modifications and Networks to Proteomics / edited by Cathy H. Wu, Cecilia N. Arighi, Karen E. Ross
New York, NY : Springer New York, 2017. (@Methods in Molecular Biology)
978-1-4939-6783-4
(ABES)198865996
Methods in molecular biology (Clifton, N.J.) ; v. 1558
Springer protocols (Series)
9781493967810
1493967819
1493967835
9781493967834
2016963231
http://www.springerprotocols.com/BookToc/doi/10.1007/978-1-4939-6783-4
http://www.springerprotocols.com/BookToc/doi/10.1007/978-1-4939-6783-4
NLM
161222
20200203172148.0
19422003
eng